Guillermo Orti

Guillermo Orti

Weintraub Professor of Biology
Lisner Hall 411
Phone: 202-994-7065


Molecular systematics and phylogeography.

Current Research

I am an evolutionary biologist with a primary interest in molecular systematics and phylogeography. My research has focused on a diversity of biological systems and questions conceptually unified by a phylogenetic perspective informed by gene genealogies. Most of my work has been empirical, based on comparative DNA sequence and microsatellite data analysis, predominantly focusing on the evolution of fishes. A major project to assemble the tree of life for fishes involved participation in the Euteleost Tree of Life Project (EToL), for which we contributed a set of molecular markers now widely used for fish phylogenetics ("the EToL markers"). My lab is now developing a new set of phylogenetic markers based on target capture approaches and next-gen sequencing. The new molecular phylogeny of fishes produced by EToL and colleagues is the basis of a new classification, recently posted and curated by a research coordination network (DeepFin) that I lead. Other research interests take me frequently to Patagonia and to the Amazon where, through international collaborations, we are investigating phylogeny and phylogeography of local fish communities.

Current lab members

PhD Students:

Andrew Thompson (killifish evolution)
Daniela Campanella (pejerrey genomics)
Dahiana Arcila Mesa (characiform phylogeny)
Lily Hughes (phylogeography)


Ricardo Betancur (fish tree of life)
Kyung Ko (bioinformatics)


Licenciado en Biología, Universidad de Buenos Aires, Argentina (1981)
Ph.D., Department of Ecology and Evolution, Stony Brook University, New York  (1995)


Full text publications.

Betancur-R, R, G. Naylor, G. Ortí. 2013. Conserved genes, sampling error, and phylogenomic inference. Systematic Biology (in press).

Conte-Grand, C. J. Sommer, G. Ortí, V. Cussac. 2013. The populations of Odontesthes (Teleostei: Atheriniformes) in the Andean Region: body shape and hybrid individuals. Neotropical Ichthyology (in press).

Rueda, E.C., P. Carriquiriborde, A. M. Monzon, G.M. Somoza, G. Ortí. 2013. Seasonal variation in genetic population structure of sábalo (Prochilodus lineatus) in the Lower Uruguay River. Genetica DOI 10.1007/s 10709-013-9739-0.

Willis S.C., I. P. Farias, G. Ortí. 2013. Testing mitochondrial capture and deep coalescence in Amazonian cichlid fishes (Cichlidae: Cichla). Evolution doi: 10.1111/evo. 12230 (in press).

Willis S.C., I. P. Farias, G. Ortí. 2013. Multi-Locus species Tree for the Amazonian Peacock Basses (Cichlidae: Cichla): Emergent phylogenetic signal despite limited nuclear variation. Molecular Phylogenetics and Evolution 69(3): 479-490, doi. 10.1016/j.ympev.2013.07.031

Betancur-R., R., C. Li, T. A. Munroe, J. A. Ballesteros, G. Ortí. 2013. Addressing the gene-tree discordance and non-stationarity to resolve a multi-locus phylogeny of the flatfishes (Teleostei: Pleuronectiformes). Systematic Biology, 62(5): 763-785 doi.

Betancu-R., R., R.E. Broughton, E.O. Wiley, K. Carpenter, J.A. Lopez, C. Li, G. Arratia, N.I. Holcroft, D. Arcila, M. Sanciango, J. Cureton, F. Zhang, T. Buser, M. Campbell, T. Rawley, J.A. Ballesteros, G. Lu, T. Grande, & G. Ortí. 2013. The tree of life and a new classification of bony fishes. PLoS Currents Tree of Life, Apr 18 [last modified: 2013 Apr 23]. Edition 1. doi: 10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288.

Broughton, R.E., R. Betancur-R, C. Li, G Arratia, G. Ortí. 2013. Multi-locus phylogenetic analysis reveals the pattern and tempo of bony fish evolution. PL0S Currents Tree of Life, 2013 Apr 16 [last modified: 2013 May 9]. Edition 1. doi: 10.1371/currents.tol.2ca8041495ffafd0c92756e75247483e.

Mariguela, T.C., G. Ortí, K.T. Abe, G.S. Avelino, C. Oliveira. 2013. Composition and interrelationships of a large Neotropical freshwater fish group, the subfamily Cheirodontinae (Characiformes: Characidae): a case study based on mitochondrial and nuclear DNA sequences. Molecular Phylogenetics and Evolution 68 (2013) 23-34.

Grubich J.R., S. Huskey, S.Crofts, G. Ortí, and J. Porto. 2012. MEGA-BITES: Extreme jaw forces of living and extinct piranhas (Serrasalmidae). Scientific Reports, in press.

Willis, S.C., J. Macrander, I. P. Farias and G. Ortí. 2012. Simultaneous delimitation of species and quantification of interspecific hybridization in Amazonian peacock cichlids (genus Cichla) using multi-locus data. BMC Evolutionary Biology, 12: 96 (22 June 2012).

Betancur, R., G. Ortí, A.M. Stein, A.P. Marceniuk, and A. Pyron. 2012. Apparent signal of competition limiting diversification after ecological transitions from marine to freshwater habitats. Ecology Letters, 15(8): 822–830.

Bernardi, G., E.O. Wiley, H., Mansour, M.R. Miller, G. Ortí, D. Haussler, S.J. O'Brien, O.A. Ryder, B. Venkatesh. 2012. The Fishes of Genome 10K. Marine Genomics 7 (2012): 3–6.

Willis, S.C., H. López-Fernández, C.G. Montaña, I.P. Farias, G. Ortí. 2012. Species-level phylogeny of ‘Satan’s perches’ based on discordant gene trees (Teleostei: Cichlidae: Satanoperca Günther 1862). Molecular Phylogenetics and Evolution 63(3): 798-808.

Oliveira, C., G.S. Avelino, K.T. Abe, T.C. Mariguela, R.C. Benine, G. Ortí, R.P. Vari, R.M. Corrêa e Castro. 2011. Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling. BMC Evolutionary Biology 11: 275.

Rueda, EC, P. Amavet, F. Brancolini, J. Sommer, and G. Ortí. 2011b. Isolation and characterization of eight polymorphic microsatellite markers for the migratory characiform fish, Salminus brasiliensis, Journal of Fish Biology, 79: 1370-1375.

Li, C., R. Betancur-R.; W. L. Smith, and G. Ortí. 2011. Monophyly and interrelationships of Snook and Barramundi (Centropomidae sensu Greenwood) and five new markers for fish phylogenetics. Molecular Phylogenetics and Evolution, 60: 463-471.

Carvalho-Costa, L.F., N.M. Piorski, S.C. Willis, P.M. Galetti Jr., and G. Ortí. 2011. Molecular systematics of the neotropical shovelnose catfish genus Pseudoplatystoma Bleeker 1862 based on nuclear and mtDNA markers. Molecular Phylogenetics and Evolution 59: 177-194.

Willis, SC, M Nunes, CG Montana, IP Farias, G Ortí, and NR Lovejoy. 2010. The Casiquiare River as a dispersal corridor between the Amazonas and Orinoco River basins: Biogeographic analysis of the genus Cichla. Molecular Ecology 19(5): 1014-1030.

Roa-Varón, A. and G. Ortí. 2009. Phylogenetic relationships among families of Gadiformes (Teleostei, Paracanthopterygii) based on nuclear and mitochondrial data. Molecular Phylogenetics and Evolution, 52(3): 688-704. doi:10.1016/j.ympev.2009.03.020.

Ortí, G. and  Li, C. 2009. Phylogeny and Classification (Chapter 1). Pp 1-24 in Reproductive Biology and Phylogeny of Fish (Agnatha and Bony Fishes), Series Editor B.M.G. Jamieson, Science Publishers, Enfield, New Hampshire, 788 pp.

Li, C., G. Lu, and G. Ortí. 2008. Optimal Data Partitioning and a Test Case for Ray-finned Fishes (Actinopterygii) Based on Ten Nuclear Loci. Systematic Biology 57(4): 519–539.

Ortí, G., A. Sivasundar, K. Dietz, and M. Jégu. 2008. Phylogeny of the Serrasalmidae (Characiformes) based on mitochondrial DNA sequences. Genetics and Molecular Biology 31, 1 (suppl): 343-351.

Li, C., G. Ortí, G. Zhang, and G. Lu. 2007. A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study. BMC Evolutionary Biology 7: 44.

Ross, C., J. French, and G. Ortí. 2007. Germ Line Chimerism and Paternal Care in Marmosets (Callithrix kuhlii). Proc. Natl. Acad. Sci. USA 104(15): 6278–6282.

Guilgur, L.G., G. Ortí, P,H. Strobl-Mazzulla, J.I. Fernandino, L.A. Miranda & G. Somoza. 2007. Characterization of the cDNAs encoding three GnRH forms in the pejerrey fish Odontesthes bonariensis (Atheriniformes) and the evolution of GnRH precursors. Journal of Molecular Evolution 64: 614–627.

Steinauer, M.L., B.B. Nickol, R. Broughton, G. Ortí. 2005. First Sequenced Mitochondrial Genome from the Phylum Acanthocephala (Leptorhynchoides thecatus) and its Phylogenetic Position Within Metazoa. Journal of Molecular Evolution 60: 706-715.

Chen, W.-J., G. Ortí, A. Meyer. 2004. Novel evolutionary relationship among four fish model systems. Trends in Genetics 20(9): 424-431. Lopez, A. W.-J. Chen, G. Ortí. 2004. Esociform phylogeny. Copeia 2004(3): 449-464.

Sivasundar, A., E. Bermingham, and G. Ortí. 2001. Population structure and biogeography of migratory freshwater fishes (Prochilodus: Characiformes) in major South American rivers. Molecular Ecology 10(2): 407-418.

Public Education

National Geographic TV documentary “Megapiranha”  (Explorer series), Air date 17 May 2011. Expedition to the Xingu River featured in the show took place in August 2010.